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3,625 Data sources

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  • This site provides access to research output from the following three organisations based in Plymouth: The Marine Biological Association (MBA), Plymouth Marine Laboratory (PML) and the Sir Alister Hardy Foundation for Ocean Science (SAHFOS). The interface is available in English.

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  • CancerModels.Org is a cancer research platform that aggregates clinical, genomic and functional data from various types of patient-derived cancer models (PDCMs)- xenografts, organoids and cell lines. Currently, the portal has over 7000 PDCMs across multiple cancer types, including rare paediatric models and models from minority ethnic backgrounds. The CancerModels.Org standardises, harmonises and integrates clinical metadata, molecular and treatment-based data from academic and commercial providers worldwide. It is the largest open access and free to consumer resource of this kind.

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  • OmicsPred is a resource for predicting multi-omics data (proteomics, metabolomics, transcriptomics etc.) directly from genotypes. To do this, we use extensive multi-omics data to train genetic scores using machine learning. Here, you can explore and download the genetic scores for a wide range of biomolecular traits in human blood as well as the summary statistics of their associations with key traits and diseases in the UK Biobank.

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  • Research Data Leeds is the institutional research data repository for the University of Leeds. The service aims to facilitate data discovery and data sharing. The repository houses data generated by researchers at the University of Leeds.

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  • The IPD-IMGT/HLA Database provides a specialist database for sequences of the human major histocompatibility complex (MHC) and includes the official sequences named by the WHO Nomenclature Committee For Factors of the HLA System. The IMGT/HLA Database was established to provide a locus-specific database (LSDB) for the allelic sequences of the genes in the HLA system, also known as the human MHC. The IMGT/HLA Database was first released in 1998 and subsequently incorporated as a module of IPD in 2012.

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  • PDBe-KB (Protein Data Bank in Europe - Knowledge Base) is a community-driven resource managed by the PDBe team, collating functional annotations and predictions for structure data in the PDB archive. PDBe-KB is a collaborative effort between PDBe and a diverse group of bioinformatics resources and research teams. The goal of PDBe-KB is two-fold: (i) to increase the visibility and reduce the fragmentation of annotations contributed by specialist data resources, and to make these data more findable, accessible, interoperable and reusable (FAIR) and (ii) to place macromolecular structure data in their biological context, thus facilitating their use by the broader scientific community in fundamental and applied research.

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  • Genetic, genomic and molecular information pertaining to the model organism Drosophila melanogaster and related sequences. This database also contains information relating to human disease models in Drosophila, the use of transgenic constructs containing sequence from other organisms in Drosophila, and information on where to buy Drosophila strains and constructs.

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3,625 Data sources
  • This site provides access to research output from the following three organisations based in Plymouth: The Marine Biological Association (MBA), Plymouth Marine Laboratory (PML) and the Sir Alister Hardy Foundation for Ocean Science (SAHFOS). The interface is available in English.

    more_vert
  • CancerModels.Org is a cancer research platform that aggregates clinical, genomic and functional data from various types of patient-derived cancer models (PDCMs)- xenografts, organoids and cell lines. Currently, the portal has over 7000 PDCMs across multiple cancer types, including rare paediatric models and models from minority ethnic backgrounds. The CancerModels.Org standardises, harmonises and integrates clinical metadata, molecular and treatment-based data from academic and commercial providers worldwide. It is the largest open access and free to consumer resource of this kind.

    more_vert
  • OmicsPred is a resource for predicting multi-omics data (proteomics, metabolomics, transcriptomics etc.) directly from genotypes. To do this, we use extensive multi-omics data to train genetic scores using machine learning. Here, you can explore and download the genetic scores for a wide range of biomolecular traits in human blood as well as the summary statistics of their associations with key traits and diseases in the UK Biobank.

    more_vert
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  • Research Data Leeds is the institutional research data repository for the University of Leeds. The service aims to facilitate data discovery and data sharing. The repository houses data generated by researchers at the University of Leeds.

    more_vert
  • more_vert
  • The IPD-IMGT/HLA Database provides a specialist database for sequences of the human major histocompatibility complex (MHC) and includes the official sequences named by the WHO Nomenclature Committee For Factors of the HLA System. The IMGT/HLA Database was established to provide a locus-specific database (LSDB) for the allelic sequences of the genes in the HLA system, also known as the human MHC. The IMGT/HLA Database was first released in 1998 and subsequently incorporated as a module of IPD in 2012.

    more_vert
  • PDBe-KB (Protein Data Bank in Europe - Knowledge Base) is a community-driven resource managed by the PDBe team, collating functional annotations and predictions for structure data in the PDB archive. PDBe-KB is a collaborative effort between PDBe and a diverse group of bioinformatics resources and research teams. The goal of PDBe-KB is two-fold: (i) to increase the visibility and reduce the fragmentation of annotations contributed by specialist data resources, and to make these data more findable, accessible, interoperable and reusable (FAIR) and (ii) to place macromolecular structure data in their biological context, thus facilitating their use by the broader scientific community in fundamental and applied research.

    more_vert
  • Genetic, genomic and molecular information pertaining to the model organism Drosophila melanogaster and related sequences. This database also contains information relating to human disease models in Drosophila, the use of transgenic constructs containing sequence from other organisms in Drosophila, and information on where to buy Drosophila strains and constructs.

    more_vert