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- Data Repository Denmark, Slovakia, Lithuania, Poland, Germany, Italy, Hungary, Czech Republic, Greece Compatibility:Not yet registeredPartners:GEUS, SGIDŠ, ITG, PIG, LIAG +7 partners Natural Sciences, Geosciences (including Geography), Geosciences (including Geography)GEUS,SGIDŠ,ITG,PIG,LIAG,GLD,ELGI,MGL,CGS,GCX,CGS,ITSAK
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BuG@Sbase is a microbial gene expression and comparative genomic database containing microarray datasets.
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The repository contains reports (Projects, Bachelor or Master Theses, Technical Notes, ...) prepared by students and staff working with Prof. Scholz at Hamburg University of Applied Sciences (HAW Hamburg). AERO is part of the Department of Automotive and Aeronautical Engineering in the Faculty of Engineering and Computer Science and of the Strategic Research Area Mobility & Transport. The interface is available in English.
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NODE (The National Omics Data Encyclopedia) provides an integrated, compatible, comparable, and scalable multi-omics resource platform that supports flexible data management and effective data release. NODE uses a hierarchical data architecture to support storage of muti-omics data including sequencing data, MS based proteomics data, MS or NMR based metabolomics data, and fluorescence imaging data. Launched in early 2017, NODE has collected and published over 900 terabytes of omics data for researchers from China and all over the world in last three years, 22% of which contains multiple omics data. NODE provides functions around the whole life cycle of omics data, from data archive, data requests/responses to data sharing, data analysis, data review and publish.
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mirDNMR is a database for the collection of gene-centered background DNMRs obtained from different methods and population variation data. The database has the following functions: (i) browse and search the background DNMRs of each gene predicted by four different methods, including GC content (DNMR-GC), sequence context (DNMR-SC), multiple factors (DNMR-MF) and local DNA methylation level (DNMR-DM); (ii) search variant frequencies in publicly available databases, including ExAC, ESP6500, UK10K, 1000G and dbSNP and (iii) investigate the DNM burden to prioritize candidate genes based on the four background DNMRs using three statistical methods (TADA, Binomial and Poisson test). In conclusion, mirDNMR can be widely used to identify the genetic basis of sporadic genetic diseases.
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The UK Stem Cell Bank (UKSCB) facilitates the use and sharing of quality-controlled stem cell lines to support scientific research and clinical development of stem cell therapies. The work of the UK Stem Cell Bank covers three main areas: banking for all UK-derived human embryonic stem cell lines, research in the standardisation, quality and safety of human pluripotent stem cell (hPSC)-based products, and regulation regarding international best practice, policies and guidelines relating to stem cell use and regulation around the world.
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- Data Repository Denmark, Slovakia, Lithuania, Poland, Germany, Italy, Hungary, Czech Republic, Greece Compatibility:Not yet registeredPartners:GEUS, SGIDŠ, ITG, PIG, LIAG +7 partners Natural Sciences, Geosciences (including Geography), Geosciences (including Geography)GEUS,SGIDŠ,ITG,PIG,LIAG,GLD,ELGI,MGL,CGS,GCX,CGS,ITSAK
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For further information contact us at helpdesk@openaire.eu - Data Repository United Kingdom Compatibility:Not yet registeredPartners:SGUL Life Science, Comparative Genomics, Expression dataSGUL
BuG@Sbase is a microbial gene expression and comparative genomic database containing microarray datasets.
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The repository contains reports (Projects, Bachelor or Master Theses, Technical Notes, ...) prepared by students and staff working with Prof. Scholz at Hamburg University of Applied Sciences (HAW Hamburg). AERO is part of the Department of Automotive and Aeronautical Engineering in the Faculty of Engineering and Computer Science and of the Strategic Research Area Mobility & Transport. The interface is available in English.
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NODE (The National Omics Data Encyclopedia) provides an integrated, compatible, comparable, and scalable multi-omics resource platform that supports flexible data management and effective data release. NODE uses a hierarchical data architecture to support storage of muti-omics data including sequencing data, MS based proteomics data, MS or NMR based metabolomics data, and fluorescence imaging data. Launched in early 2017, NODE has collected and published over 900 terabytes of omics data for researchers from China and all over the world in last three years, 22% of which contains multiple omics data. NODE provides functions around the whole life cycle of omics data, from data archive, data requests/responses to data sharing, data analysis, data review and publish.
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mirDNMR is a database for the collection of gene-centered background DNMRs obtained from different methods and population variation data. The database has the following functions: (i) browse and search the background DNMRs of each gene predicted by four different methods, including GC content (DNMR-GC), sequence context (DNMR-SC), multiple factors (DNMR-MF) and local DNA methylation level (DNMR-DM); (ii) search variant frequencies in publicly available databases, including ExAC, ESP6500, UK10K, 1000G and dbSNP and (iii) investigate the DNM burden to prioritize candidate genes based on the four background DNMRs using three statistical methods (TADA, Binomial and Poisson test). In conclusion, mirDNMR can be widely used to identify the genetic basis of sporadic genetic diseases.
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For further information contact us at helpdesk@openaire.eu - Data Repository United Kingdom Compatibility:Not yet registeredPartners:NIBSC Life Science, Preclinical Studies, stem cellNIBSC
The UK Stem Cell Bank (UKSCB) facilitates the use and sharing of quality-controlled stem cell lines to support scientific research and clinical development of stem cell therapies. The work of the UK Stem Cell Bank covers three main areas: banking for all UK-derived human embryonic stem cell lines, research in the standardisation, quality and safety of human pluripotent stem cell (hPSC)-based products, and regulation regarding international best practice, policies and guidelines relating to stem cell use and regulation around the world.
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