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re3data: r3d100013978
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For further information contact us at helpdesk@openaire.eu - Institutional Repository Spain Compatibility:OpenAIRE PubRepos v4.0Partners:Carlos III University of Madrid MultidisciplinaryCarlos III University of MadridOAI-PMH URL: https://e-archivo.uc3m.es/dspace-oai/request
This site is an institutional repository providing access to materials produced by the members of the university. The site is supported with background information on Open Access in general, and publisher copyright issues in particular. Registered users on the site can set up email alerts, to notify them of newly added relevant content. The interface is available in Spanish and English.
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For further information contact us at helpdesk@openaire.eu - Data Repository Canada Compatibility:Not yet registeredPartners:Department of Plant Sciences, University of Saskatchewan, Canada Agriculture, Life Science, GeneticsDepartment of Plant Sciences, University of Saskatchewan, Canada
KnowPulse is a breeder-focused web portal that integrates genetics and genomics of pulse crops with model genomes.
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re3data: r3d100013301
DisGeNET is a discovery platform containing one of the largest collections available of genes and variants involved in human diseases. DisGeNET integrates data from expert curated repositories, GWAS catalogues, animal models, and the scientific literature, and covers the whole landscape of human diseases. The current version of DisGeNET (v7.0) contains 1,134,942 gene-disease associations (GDAs), between 21,671 genes and 30,170 diseases, disorders, traits, and clinical or abnormal human phenotypes, and 369,554 variant-disease associations (VDAs), between 194,515 variants and 14,155 diseases, traits, and phenotypes. The data are homogeneously annotated with controlled vocabularies and community-driven ontologies. Additionally, several original metrics are provided to assist the prioritization of genotype-phenotype relationships. The information is accessible through a web interface, a Cytoscape App, an RDF SPARQL endpoint, a REST API, and an R package.
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For further information contact us at helpdesk@openaire.eu - Data Repository Canada Compatibility:Not yet registeredPartners:Princess Margaret Cancer Centre Epigenomics, Bioinformatics, nucleotidePrincess Margaret Cancer Centre
re3data: r3d100013918
DNAmod is an open-source database (https://dnamod.hoffmanlab.org) that catalogues DNA modifications and provides a single source to learn about their properties. The database annotates the chemical properties and structures of all curated modified DNA bases, and a much larger list of candidate chemical entities. DNAmod includes manual annotations of available sequencing methods, descriptions of their occurrence in nature, and provides existing and suggested nomenclature. DNAmod enables researchers to rapidly review previous work, select mapping techniques, and track recent developments concerning modified bases of interest.
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For further information contact us at helpdesk@openaire.eu - Data Repository United Kingdom Compatibility:Not yet registeredPartners:EMBL-EBI Genomics, Genetic Polymorphism, curated informationEMBL-EBI
re3data: r3d100010814
The Database of Genomic Variants archive (DGVa) is a repository that provides archiving, accessioning and distribution of publicly available genomic structural variants, in all species.
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re3data: r3d100012415
OAI-PMH URL: http://wrap.warwick.ac.uk/cgi/oai2This site provides access to the research output of the institution. Users may set up Atom or RSS feeds to be alerted to new content. The interface is available in English.
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For further information contact us at helpdesk@openaire.eu - Data Repository United States, Canada Compatibility:Not yet registeredPartners:NHLBI, Canada's Michael Smith Genome Sciences Centre, BC Cancer Foundation, Genome Canada, BCCA Life Sciences, Zoology, Animal Genetics, Cell and Developmental BiologyNHLBI,Canada's Michael Smith Genome Sciences Centre,BC Cancer Foundation,Genome Canada,BCCA
re3data: r3d100010645
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- Data Repository Canada Compatibility:Not yet registeredPartners:UofT Life Sciences, Basic Biological and Medical Research, General GeneticsUofT
re3data: r3d100013978
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For further information contact us at helpdesk@openaire.eu - Institutional Repository Spain Compatibility:OpenAIRE PubRepos v4.0Partners:Carlos III University of Madrid MultidisciplinaryCarlos III University of MadridOAI-PMH URL: https://e-archivo.uc3m.es/dspace-oai/request
This site is an institutional repository providing access to materials produced by the members of the university. The site is supported with background information on Open Access in general, and publisher copyright issues in particular. Registered users on the site can set up email alerts, to notify them of newly added relevant content. The interface is available in Spanish and English.
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For further information contact us at helpdesk@openaire.eu - Data Repository Canada Compatibility:Not yet registeredPartners:Department of Plant Sciences, University of Saskatchewan, Canada Agriculture, Life Science, GeneticsDepartment of Plant Sciences, University of Saskatchewan, Canada
KnowPulse is a breeder-focused web portal that integrates genetics and genomics of pulse crops with model genomes.
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re3data: r3d100013301
DisGeNET is a discovery platform containing one of the largest collections available of genes and variants involved in human diseases. DisGeNET integrates data from expert curated repositories, GWAS catalogues, animal models, and the scientific literature, and covers the whole landscape of human diseases. The current version of DisGeNET (v7.0) contains 1,134,942 gene-disease associations (GDAs), between 21,671 genes and 30,170 diseases, disorders, traits, and clinical or abnormal human phenotypes, and 369,554 variant-disease associations (VDAs), between 194,515 variants and 14,155 diseases, traits, and phenotypes. The data are homogeneously annotated with controlled vocabularies and community-driven ontologies. Additionally, several original metrics are provided to assist the prioritization of genotype-phenotype relationships. The information is accessible through a web interface, a Cytoscape App, an RDF SPARQL endpoint, a REST API, and an R package.
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For further information contact us at helpdesk@openaire.eu - Data Repository Canada Compatibility:Not yet registeredPartners:Princess Margaret Cancer Centre Epigenomics, Bioinformatics, nucleotidePrincess Margaret Cancer Centre
re3data: r3d100013918
DNAmod is an open-source database (https://dnamod.hoffmanlab.org) that catalogues DNA modifications and provides a single source to learn about their properties. The database annotates the chemical properties and structures of all curated modified DNA bases, and a much larger list of candidate chemical entities. DNAmod includes manual annotations of available sequencing methods, descriptions of their occurrence in nature, and provides existing and suggested nomenclature. DNAmod enables researchers to rapidly review previous work, select mapping techniques, and track recent developments concerning modified bases of interest.
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For further information contact us at helpdesk@openaire.eu - Data Repository United Kingdom Compatibility:Not yet registeredPartners:EMBL-EBI Genomics, Genetic Polymorphism, curated informationEMBL-EBI
re3data: r3d100010814
The Database of Genomic Variants archive (DGVa) is a repository that provides archiving, accessioning and distribution of publicly available genomic structural variants, in all species.
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re3data: r3d100012415
OAI-PMH URL: http://wrap.warwick.ac.uk/cgi/oai2This site provides access to the research output of the institution. Users may set up Atom or RSS feeds to be alerted to new content. The interface is available in English.
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For further information contact us at helpdesk@openaire.eu - Data Repository United States, Canada Compatibility:Not yet registeredPartners:NHLBI, Canada's Michael Smith Genome Sciences Centre, BC Cancer Foundation, Genome Canada, BCCA Life Sciences, Zoology, Animal Genetics, Cell and Developmental BiologyNHLBI,Canada's Michael Smith Genome Sciences Centre,BC Cancer Foundation,Genome Canada,BCCA
re3data: r3d100010645
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