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UG

University of Gdańsk
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94 Projects, page 1 of 19
  • Funder: European Commission Project Code: 101025900
    Overall Budget: 252,079 EURFunder Contribution: 252,079 EUR

    Memory of gene expression states is essential for development and maintenance of tissues. Chromatin, a protein DNA complex, is implicated in the process. Local, chromatin feedback loops are involved in maintenance of gene silencing, but analogous mechanisms for preservation of active states are unknown. In order to reveal feedback loops for active gene expression states it is crucial to uncouple them from ongoing transcription, as it occurs in the case of maintenance of silent states. Such partition takes place during trained immunity – memory of the innate immune system. A key paradigm is interferon gamma (IFNγ) stimulation. While IFNγ induces many genes, a subset of those is maintained in a poised, inactive state that allows for rapid re-activation at a later time – an event called transcriptional memory. In my ongoing research I have discovered novel genes that show strong transcriptional memory of prior IFNγ activation and have obtained initial mechanistic insights into the role of chromatin in the process. Importantly, I discovered that memory results in a larger proportion of cells expressing the target gene. This forms the basis of a cell sorting, high throughput assay that I have developed. I am now in a unique position to capitalize on those discoveries and tools. I aim to identify novel transcriptional memory maintenance factors in human cells using an unbiased approach based on an efficient cell selection strategy combined with genome wide, CRISPR-Cas9 mutagenesis protocols. Secondly I wish to establish the function of the identified components in the stability of dendritic cells identity after differentiation form monocytes. The multidisciplinary and unique perspective of this project: combining gene expression analysis and selection strategies with immunological expertise will advance our understanding of the mechanisms underlying maintenance of gene expression states and contribute to the development of new immune therapies and vaccines.

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  • Funder: European Commission Project Code: 797823
    Overall Budget: 147,296 EURFunder Contribution: 147,296 EUR

    Baltic amber from Northern Europe is an outstanding deposit due to the great number and diversity of preserved organisms. Although it is the richest source of fossils ever, science has consistently failed to define its geological age, despite applying various traditional approaches. It limits the scientific utility of all Baltic amber fossils in evolutionary divergence time estimation. This is very unfortunate, especially because these fossils would be very important for reconstructing evolutionary events in the Eocene, which is known as a deep-time analogue of current climatic changes. The core idea of this project is to apply an innovative and highly promising approach of precise dating for this very important fossil deposit by using DNA, morphology of extinct and extant species, and powerful statistics. I propose to time-calibrate Baltic amber fossils using a dataset from my previous project with the addition of Baltic amber and other, well-dated Cenozoic fossils. With these data, I will apply an existing method for divergence time estimation, the total-evidence dating under the fossilized birth–death process with its extension. The extension of the method will allow for phylogenetic estimation of the age of fossils from Baltic amber, and thus the amber itself. Firmly establishing the age of Baltic amber fossils will be a breakthrough for evolutionary biology, palaeoecology, biogeography, and palaeoclimatology. The project builds on my experience as a palaeoentomologist and evolutionary biologist, and it greatly expands my horizons as a future leader through gaining new insights and learning new facts and analytical methods, working in multidisciplinary academic environments and acquiring additional skills transferrable to new scientific areas. The hosts are the leading specialists in statistical phylogenetics and palaeontological studies, and leaders of dynamic research groups targeting different methods for understanding evolutionary patterns and processes

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  • Funder: European Commission Project Code: 101223317

    Applying for Award for Gender Equality Champions – Newcomer Gender Equality Champions University of Gdańsk (UG) is presenting its first Gender Equality Plan (GEP): “Gender Equality Plan for the University of Gdansk. Equality measures for the years 2022 – 2023”. We are demonstrating a full process that the institution has gone through including: audit, planning, implementation, monitoring and evaluation, progress achieved explaining in detail our approach which was: data-based, expert-supported, bottom-up developed and decision-maker engaging. GEP design has been based on the carefully conducted diagnosis of the current situation on equal treatment of men and women at UG. GEP has been approved by UG Rector in 2021 and became effective from 2022. As a public document, accessible from the UG website, it is aimed at all interested parties, sets out specific goals and areas of activity, entails monitoring and collection of data, promotes good practices and envisages training sessions and building of the organization’s capacity. GEP for UG comprises five goals, corresponding measures and indicators to be achieved which cover all five recommended areas of gender equality. We also present a diverse group of institution's members who have been involved in the process of design, implementation and progress assessment since the beginning. We are convinced that after completing realization of its first GEP the University of Gdansk has made substantial progress in the area of gender equality within the institution itself and has also inspired and supported other institutions in the region and beyond for a significant impact in advancing gender equality processes in higher education institutions in Poland. Based on the evaluation of the first GEP, UG has already designed and approved a second GEP for 2024-2028 to carry on the interventions for increased gender equality.

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  • Funder: National Science Foundation Project Code: 8907281
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  • Funder: European Commission Project Code: 322150
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