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OMNIWeb
Data Repository United States Compatibility:Not yet registeredPartners:SPDF Natural Sciences, Optics, Quantum Optics and Physics of Atoms, Molecules and Plasmas, Optics, Quantum Optics, Atoms, Molecules, Plasmas
SPDF
re3data: r3d100011466
re3data: r3d100011466
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Barrow Area Information Database
Data Repository United States Compatibility:Not yet registeredPartners:NSF, UNAVCO, BASC, The University of Texas at El Paso, Department of Biological Sciences Natural Sciences, Geosciences (including Geography)
NSF,
UNAVCO,
BASC,
The University of Texas at El Paso, Department of Biological Sciences
re3data: r3d100011029
re3data: r3d100011029
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ASU Library Repository Services

Institutional Repository United States Compatibility:Not yet registeredPartners:ASU

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Biodiversity Literature Repository
Data Repository Switzerland Compatibility:Not yet registeredPartners:Plazi GmbH Phylogeny, Biodiversity, Taxonomic classification
Plazi GmbH
doi: 10.25504/fairsharing.c44d2b
doi: 10.25504/fairsharing.c44d2b
The Biodiversity Literature Repository (BLR) is a research infrastructure (RI) comprising the BLR Community on Zenodo at the European Center for Nuclear Research (CERN), and services to search and retrieve the data (Ocellus, Zenodeo API, BLR website). BLR’s focus is on biodiversity data liberated from scholarly publications, and it uses custom metadata linking to external vocabularies covering the needs of the biodiversity community. This includes taxonomic treatment or figures as well as the deposit of the original article annotated with metadata describing the data contained in the articles itself, as well as related identifiers for figures and and treatments therein. The main data import is through TreatmentBank or via publishers such as Pensoft. With over 650,000 deposits, BLR is the single largest community in Zenodo. It’s data is widely reused, for example by the Global Biodiversity Information Facility (GBIF). All data in BLR is published under the CC0 Public Domain Dedication, remaining free for anyone to use, anywhere, for any purpose. Note from the FAIRsharing team: we have classified the status of the resource as 'uncertain' because the content of the database is no longer accessible. We are making every effort to engage with the resource owners to understand if it is a temporary issue or if the resource is no longer active.
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Drug Mechanism Database
Data Repository United States Compatibility:Not yet registeredPartners:TSRI Biomedical Science, Drug report, drug
TSRI
doi: 10.25504/fairsharing.c9f7c0
doi: 10.25504/fairsharing.c9f7c0
Drug Mechanism Database (DrugMechDB) compiles curated mechanism of action linking a drug to a disease. Most drug mechanisms are described simply as a protein target, or a pathway, that then treats the disease. However, there are usually more steps across a biological knowledge graph required to traverse from the target through its mechanism to the reduction of a disease. DrugMechDB catalog a subset of known drug-disease indications as a path through a network of biomedical entities.
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PiroplasmaDB
Data Repository United States Compatibility:Not yet registeredPartners:Eukaryotic Pathogen, Vector & Host Informatics Resource (VEuPathDB) Bioinformatics Resource Center (BRC) Functional Genomics, Comparative Genomics, Structural Genomics
Eukaryotic Pathogen, Vector & Host Informatics Resource (VEuPathDB) Bioinformatics Resource Center (BRC)
doi: 10.25504/fairsharing.a5a0af
re3data: r3d100012460
doi: 10.25504/fairsharing.a5a0af
re3data: r3d100012460
PiroplasmaDB is one of the databases that can be accessed through the VEuPathDB portal. While each of these groups is supported by a taxon-specific database built upon the same infrastructure, the VEuPathDB portal offers an entry point to all these resources, and the opportunity to leverage orthology for searches across genera.
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VCU Libraries Digital Collections

Institutional Repository United States Compatibility:Not yet registeredPartners:VCU

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Digital Commons@Becker

Institutional Repository United States Compatibility:Not yet registeredPartners:WSU, WUSM

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World Data Center of Microorganisms
Data Repository China (People's Republic of) Compatibility:Not yet registeredPartners:WFCC MIRCEN, IMCAS Life Sciences, Microbiology, Virology and Immunology, Biology
WFCC MIRCEN,
IMCAS
re3data: r3d100010448
re3data: r3d100010448
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Getty Search Gateway

Institutional Repository United States Compatibility:Not yet registeredPartners:J. Paul Getty Museum

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7,171 Data sources

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OMNIWeb
Data Repository United States Compatibility:Not yet registeredPartners:SPDF Natural Sciences, Optics, Quantum Optics and Physics of Atoms, Molecules and Plasmas, Optics, Quantum Optics, Atoms, Molecules, Plasmas
SPDF
re3data: r3d100011466
re3data: r3d100011466
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Barrow Area Information Database
Data Repository United States Compatibility:Not yet registeredPartners:NSF, UNAVCO, BASC, The University of Texas at El Paso, Department of Biological Sciences Natural Sciences, Geosciences (including Geography)
NSF,
UNAVCO,
BASC,
The University of Texas at El Paso, Department of Biological Sciences
re3data: r3d100011029
re3data: r3d100011029
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ASU Library Repository Services

Institutional Repository United States Compatibility:Not yet registeredPartners:ASU

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Biodiversity Literature Repository
Data Repository Switzerland Compatibility:Not yet registeredPartners:Plazi GmbH Phylogeny, Biodiversity, Taxonomic classification
Plazi GmbH
doi: 10.25504/fairsharing.c44d2b
doi: 10.25504/fairsharing.c44d2b
The Biodiversity Literature Repository (BLR) is a research infrastructure (RI) comprising the BLR Community on Zenodo at the European Center for Nuclear Research (CERN), and services to search and retrieve the data (Ocellus, Zenodeo API, BLR website). BLR’s focus is on biodiversity data liberated from scholarly publications, and it uses custom metadata linking to external vocabularies covering the needs of the biodiversity community. This includes taxonomic treatment or figures as well as the deposit of the original article annotated with metadata describing the data contained in the articles itself, as well as related identifiers for figures and and treatments therein. The main data import is through TreatmentBank or via publishers such as Pensoft. With over 650,000 deposits, BLR is the single largest community in Zenodo. It’s data is widely reused, for example by the Global Biodiversity Information Facility (GBIF). All data in BLR is published under the CC0 Public Domain Dedication, remaining free for anyone to use, anywhere, for any purpose. Note from the FAIRsharing team: we have classified the status of the resource as 'uncertain' because the content of the database is no longer accessible. We are making every effort to engage with the resource owners to understand if it is a temporary issue or if the resource is no longer active.
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Drug Mechanism Database
Data Repository United States Compatibility:Not yet registeredPartners:TSRI Biomedical Science, Drug report, drug
TSRI
doi: 10.25504/fairsharing.c9f7c0
doi: 10.25504/fairsharing.c9f7c0
Drug Mechanism Database (DrugMechDB) compiles curated mechanism of action linking a drug to a disease. Most drug mechanisms are described simply as a protein target, or a pathway, that then treats the disease. However, there are usually more steps across a biological knowledge graph required to traverse from the target through its mechanism to the reduction of a disease. DrugMechDB catalog a subset of known drug-disease indications as a path through a network of biomedical entities.
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PiroplasmaDB
Data Repository United States Compatibility:Not yet registeredPartners:Eukaryotic Pathogen, Vector & Host Informatics Resource (VEuPathDB) Bioinformatics Resource Center (BRC) Functional Genomics, Comparative Genomics, Structural Genomics
Eukaryotic Pathogen, Vector & Host Informatics Resource (VEuPathDB) Bioinformatics Resource Center (BRC)
doi: 10.25504/fairsharing.a5a0af
re3data: r3d100012460
doi: 10.25504/fairsharing.a5a0af
re3data: r3d100012460
PiroplasmaDB is one of the databases that can be accessed through the VEuPathDB portal. While each of these groups is supported by a taxon-specific database built upon the same infrastructure, the VEuPathDB portal offers an entry point to all these resources, and the opportunity to leverage orthology for searches across genera.
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VCU Libraries Digital Collections

Institutional Repository United States Compatibility:Not yet registeredPartners:VCU

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Digital Commons@Becker

Institutional Repository United States Compatibility:Not yet registeredPartners:WSU, WUSM

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World Data Center of Microorganisms
Data Repository China (People's Republic of) Compatibility:Not yet registeredPartners:WFCC MIRCEN, IMCAS Life Sciences, Microbiology, Virology and Immunology, Biology
WFCC MIRCEN,
IMCAS
re3data: r3d100010448
re3data: r3d100010448
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Getty Search Gateway

Institutional Repository United States Compatibility:Not yet registeredPartners:J. Paul Getty Museum

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OMNIWeb

Barrow Area Information Database

ASU Library Repository Services

Biodiversity Literature Repository

Drug Mechanism Database

PiroplasmaDB

VCU Libraries Digital Collections

Digital Commons@Becker

World Data Center of Microorganisms

Getty Search Gateway

OMNIWeb

Barrow Area Information Database

ASU Library Repository Services

Biodiversity Literature Repository

Drug Mechanism Database

PiroplasmaDB

VCU Libraries Digital Collections

Digital Commons@Becker

World Data Center of Microorganisms

Getty Search Gateway

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